Update link references of ownership from nexB to aboutcode-org

Signed-off-by: Chin Yeung Li <tli@nexb.com>

Author: chinyeungli

README.rst

@@ -1,7 +1,7 @@
-ScanCode plugins 
+ScanCode plugins
 ================
 
-https://github.com/nexB/scancode-plugins
+https://github.com/aboutcode-org/scancode-plugins
 
 These are various scancode plugins, some are builtins and some are extras.
 Several of them contain pre-built binaries.
@@ -17,14 +17,14 @@ native binaries.
 
 See also:
 
- - https://github.com/nexB/scancode-toolkit
+ - https://github.com/aboutcode-org/scancode-toolkit
  - https://github.com/nexB/scancode-thirdparty-src (source for some plugins
    being transitioned)
 
 
 To re-provision pre-built binaries, follow these instructions (only on Linux):
 
-- install the system package for clamav, zstd and p7zip 
+- install the system package for clamav, zstd and p7zip
 - install the patchelf from sources (provided here in src/). This is done for
   you automatically below with a configure run. Older versions may be  buggy.
 
@@ -33,7 +33,7 @@ To re-provision pre-built binaries, follow these instructions (only on Linux):
     ./configure
     etc/scripts/fetch-plugins.sh
     clamscan -v *
-        
+
 In all cases, run clamscan or an up to date antivirus scanner before pushing
 a new release.
 

binary-analysis/scancode-compiledcode/NOTICE

@@ -10,7 +10,7 @@ ScanCode software is licensed under the Apache License version 2.0.
 
 See https://www.apache.org/licenses/LICENSE-2.0 for the Apache-2.0 license text.
 
-See https://github.com/nexB/scancode-plugins for support or download. 
+See https://github.com/aboutcode-org/scancode-plugins for support or download.
 See https://aboutcode.org for more information about nexB OSS projects
 
 
@@ -26,11 +26,11 @@ The corresponding source code for pre-compiled third-party software is available
 for immediate download from the same release page where you obtained ScanCode,
 including:
 
-- https://github.com/nexB/scancode-toolkit/
+- https://github.com/aboutcode-org/scancode-toolkit/
 - https://pypi.org/project/scancode-toolkit/
 - https://thirdparty.aboutcode.org/pypi/
 - https://github.com/nexB/thirdparty-packages/pypi/
-- https://github.com/nexB/scancode-plugins/
+- https://github.com/aboutcode-org/scancode-plugins/
 - https://github.com/nexB/scancode-thirdparty-src/
 
 You may also contact us to request the source code by email at info@nexb.com or
@@ -40,4 +40,4 @@ by postal mail at:
   4966 El Camino Real #119, Los Altos, CA 94022, USA
 
 Please indicate in your communication the ScanCode tool and version for which
-you are requesting source code.
+you are requesting source code.

binary-analysis/scancode-compiledcode/setup.py

@@ -19,7 +19,7 @@
     long_description=desc,
     author='nexB',
     author_email='info@aboutcode.org',
-    url='https://github.com/nexB/scancode-plugins/binary-analysis/scancode-compiledcode',
+    url='https://github.com/aboutcode-org/scancode-plugins/binary-analysis/scancode-compiledcode',
     packages=find_packages('src'),
     package_dir={'': 'src'},
     py_modules=[splitext(basename(path))[0] for path in glob('src/*.py')],

binary-analysis/scancode-compiledcode/src/compiledcode/cppincludes.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-toolkit for support or download.
+# See https://github.com/aboutcode-org/scancode-toolkit for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -31,10 +31,10 @@ class CPPIncludesScanner(ScanPlugin):
 
     options = [
         PluggableCommandLineOption(('--cpp-includes',),
-            is_flag=True, default=False,
-            help='Collect the #includes statements in a C/C++ file.',
-            help_group=SCAN_GROUP,
-            sort_order=100),
+                                   is_flag=True, default=False,
+                                   help='Collect the #includes statements in a C/C++ file.',
+                                   help_group=SCAN_GROUP,
+                                   sort_order=100),
     ]
 
     def is_enabled(self, cpp_includes, **kwargs):

binary-analysis/scancode-compiledcode/src/compiledcode/dwarf/__init__.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -38,12 +38,12 @@ class DwarfScanner(ScanPlugin):
 
     options = [
         PluggableCommandLineOption(('--dwarf',),
-            is_flag=True, default=False,
-            help='Collect source code path from compilation units found in '
-                 'ELF DWARFs.',
-            help_group=SCAN_GROUP,
-            sort_order=100
-        ),
+                                   is_flag=True, default=False,
+                                   help='Collect source code path from compilation units found in '
+                                   'ELF DWARFs.',
+                                   help_group=SCAN_GROUP,
+                                   sort_order=100
+                                   ),
     ]
 
     def is_enabled(self, dwarf, **kwargs):
@@ -58,7 +58,7 @@ def get_dwarfs(location, **kwargs):
     Return a mapping with original_source_files and included_source_files or None.
     """
     return dict(
-#         dwarf_source_path=list(dwarf_source_path(location))
+        #         dwarf_source_path=list(dwarf_source_path(location))
         dwarf_source_path=list(dwarf_source_path_ng(location))
     )
 

binary-analysis/scancode-compiledcode/src/compiledcode/dwarf/dwarf.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -101,7 +101,8 @@ def _parseinfo(self):
             error = open(err).read()
             if error:
                 if 'bin/dwarfdump2' in error:
-                    self.parse_errors.append(error[error.index('bin/dwarfdump2'):])
+                    self.parse_errors.append(
+                        error[error.index('bin/dwarfdump2'):])
                 else:
                     self.parse_errors.append(error)
 
@@ -117,10 +118,10 @@ def cleanup(self):
         original, std_includes = cleanup(self._files)
 
         self.included_source_files.extend(x for x in std_includes
-            if x not in self.included_source_files)
+                                          if x not in self.included_source_files)
 
         self.original_source_files.extend(x for x in original
-            if x not in self.original_source_files)
+                                          if x not in self.original_source_files)
 
     def asdict(self):
         return dict([
@@ -240,7 +241,8 @@ def parse(self, dwarf, location):
         if posixpath.isabs(self.cu_filename):
             dwarf._files.append(self.cu_filename)
         else:
-            dwarf._files.append(posixpath.join(self.cu_comp_dir, self.cu_filename))
+            dwarf._files.append(posixpath.join(
+                self.cu_comp_dir, self.cu_filename))
 
         dwarf._files.extend(self.files)
 
@@ -255,4 +257,5 @@ def parse_local_symbols(self, location):
                 if posixpath.isabs(filename):
                     self.files.append(filename)
                 else:
-                    self.files.append(posixpath.join(self.cu_comp_dir, filename))
+                    self.files.append(posixpath.join(
+                        self.cu_comp_dir, filename))

binary-analysis/scancode-compiledcode/src/compiledcode/dwarf/dwarf2.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 

binary-analysis/scancode-compiledcode/src/compiledcode/dwarf/dwarfng.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -89,7 +89,8 @@ def get_dwarf_cu_and_die_paths(location):
                 file_entry = die_lineprogram.header.file_entry[decl_file_attrib.value - 1]
                 fname = bytes2str(file_entry.name)
                 try:
-                    file_dir = bytes2str(die_lineprogram['include_directory'][file_entry.dir_index - 1])
+                    file_dir = bytes2str(
+                        die_lineprogram['include_directory'][file_entry.dir_index - 1])
                 except:
                     continue
 
@@ -99,7 +100,8 @@ def get_dwarf_cu_and_die_paths(location):
                     seen.add(path)
 
                 comp_dir_attr = die.attributes.get('DW_AT_comp_dir', None)
-                comp_dir = bytes2str(comp_dir_attr.value) if comp_dir_attr else ''
+                comp_dir = bytes2str(
+                    comp_dir_attr.value) if comp_dir_attr else ''
                 fname_attr = die.attributes.get('DW_AT_name', None)
                 fname = bytes2str(fname_attr.value) if fname_attr else ''
                 if comp_dir:

binary-analysis/scancode-compiledcode/src/compiledcode/elf/__init__.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -35,10 +35,10 @@ class ELFScanner(ScanPlugin):
 
     options = [
         PluggableCommandLineOption(('--elf',),
-            is_flag=True, default=False,
-            help='Collect dependent libraries names needed by an Elf file.',
-            help_group=SCAN_GROUP,
-            sort_order=100),
+                                   is_flag=True, default=False,
+                                   help='Collect dependent libraries names needed by an Elf file.',
+                                   help_group=SCAN_GROUP,
+                                   sort_order=100),
     ]
 
     def is_enabled(self, elf, **kwargs):
@@ -52,7 +52,7 @@ def get_elf_needed_library_ng(location, **kwargs):
     """
     Return a list of needed_libraries
     """
-    results = [enl for enl in  elfng.get_elf_needed_library(location)]
+    results = [enl for enl in elfng.get_elf_needed_library(location)]
     return dict(elf_needed_library=results)
 
 
@@ -66,6 +66,6 @@ def get_elf_needed_library(location, **kwargs):
         return
     elfie = Elf(location)
     results = []
-    for needed_library in  elfie.needed_libraries:
+    for needed_library in elfie.needed_libraries:
         results.append(needed_library)
     return dict(elf_needed_library=results)

binary-analysis/scancode-compiledcode/src/compiledcode/elf/elf.py

@@ -4,7 +4,7 @@
 # ScanCode is a trademark of nexB Inc.
 # SPDX-License-Identifier: Apache-2.0
 # See http://www.apache.org/licenses/LICENSE-2.0 for the license text.
-# See https://github.com/nexB/scancode-plugins for support or download.
+# See https://github.com/aboutcode-org/scancode-plugins for support or download.
 # See https://aboutcode.org for more information about nexB OSS projects.
 #
 
@@ -31,7 +31,7 @@
 
 def next_line(file_desc):
     try:
-        return  file_desc.next()
+        return file_desc.next()
     except:
         return None
 
@@ -77,11 +77,11 @@ def __init__(self, location):
 
     def symbols(self):
         return sorted(flatten([list(self.symbols_section.local_functions),
-                        list(self.symbols_section.global_functions)]))
+                               list(self.symbols_section.global_functions)]))
 
     def setup_handlers(self):
         self.readelf_options = set([s.readelf_option
-                                     for s in self.readelf_sections])
+                                    for s in self.readelf_sections])
         for s in self.readelf_sections:
             self.handlers[s.start_re] = s
 
@@ -226,7 +226,7 @@ def demangle_chunk(symbols):
     lib_loc = get_location(SCANCODE_CPLUSPLUSFILT_LIB)
     rc, out, err = command.execute(
         cmd_loc, args,
-        lib_dir=lib_loc, 
+        lib_dir=lib_loc,
         to_files=True,
     )
     if rc != 0:
@@ -255,7 +255,7 @@ def SYMBOLS_START_RE():
 
 
 def SYMBOLS_INTERESTING_RE():
-#                                       51:    0804bf30       0     FUNC                 LOCAL           DEFAULT    14    __do_global_ctors_aux
+    #                                       51:    0804bf30       0     FUNC                 LOCAL           DEFAULT    14    __do_global_ctors_aux
     return re.compile(r"^\d*:\s+[A-Fa-f0-9]+\s+\d+\s+(FILE|FUNC|OBJECT)\s+(LOCAL|GLOBAL)\s+DEFAULT\s+\w+\s+(.*)$")
 
 
@@ -273,14 +273,14 @@ def SYMBOLS_INTERESTING_RE():
                 'call_gmon_start']
 
 standardobj = ['__CTOR_LIST__',
-                '__DTOR_LIST__',
-                '__JCR_LIST__',
-                '__CTOR_END__',
-                '__DTOR_END__',
-                '__FRAME_END__',
-                '__JCR_END__',
-                '_fp_hw',
-                '_IO_stdin_used']
+               '__DTOR_LIST__',
+               '__JCR_LIST__',
+               '__CTOR_END__',
+               '__DTOR_END__',
+               '__FRAME_END__',
+               '__JCR_END__',
+               '_fp_hw',
+               '_IO_stdin_used']
 
 
 class ElfSymbolsTableSection(object):
@@ -368,17 +368,21 @@ def __init__(self):
         self.local_objects = set()
         self.global_objects = set()
         self.global_functions = set()
-        self.locals = {"FUNC": self.local_functions, "OBJECT": self.local_objects}
-        self.globals = {"FUNC": self.global_functions, "OBJECT": self.global_objects}
+        self.locals = {"FUNC": self.local_functions,
+                       "OBJECT": self.local_objects}
+        self.globals = {"FUNC": self.global_functions,
+                        "OBJECT": self.global_objects}
         self.locglobs = {"LOCAL": self.locals, "GLOBAL": self.globals}
 
         self.external_libs_functions = set()
         self.external_libs_objects = set()
-        self.externals = {"FUNC": self.external_libs_functions, "OBJECT": self.external_libs_objects}
+        self.externals = {"FUNC": self.external_libs_functions,
+                          "OBJECT": self.external_libs_objects}
 
         self.standard_functions = set()
         self.standard_objects = set()
-        self.standards = {"FUNC": self.standard_functions, "OBJECT": self.standard_objects}
+        self.standards = {"FUNC": self.standard_functions,
+                          "OBJECT": self.standard_objects}
 
         self.shared_libs_references = set()
 
@@ -398,14 +402,14 @@ def parse(self, elf, file_like):
                     name, sharedlib = name.split("@@")
                     self.shared_libs_references.add(name)
 
-                if _type == 'FILE' and not name.startswith("<") :
+                if _type == 'FILE' and not name.startswith("<"):
                     if name in standardfiles:
                         self.standard_files.add(name)
                     else:
                         self.files.add(name)
 
                 if ((_type == 'FUNC' or _type == 'OBJECT')
-                    and not name.startswith("$")):
+                        and not name.startswith("$")):
                     if sharedlib:
                         self.externals[_type].add((name, sharedlib))
                     elif name in standardfunc or name in standardobj:
@@ -493,7 +497,8 @@ class ElfSectionHeadersSection(object):
     # starts with start_line
 
     # we need some sections to be able to et anything
-    needed_sections = ['.debug_info', '.debug_line', '.symtab', '.dynsym', '.dynstr']
+    needed_sections = ['.debug_info', '.debug_line',
+                       '.symtab', '.dynsym', '.dynstr']
     """
     $ readelf --wide --section-headers tests/dependencies-testfiles/elf/ssdeep.i686  | more
     There are 39 section headers, starting at offset 0xf5ec: