Add support for external licenses in scans #480

This adds `-dir` or `--additional-directories` as a command line
option in license detection. This allows users to specify paths to
directories of licenses and rules they'd like to use during license
detection, but would not like to add to the ScanCode database of
licenses.

This involves adding a new option in `licensedcode/plugin_license.py`,
and this option is used as a parameter in `scancode/api.py`. In this
approach, the licenses and rules contained in these additional
directories are combined with the existing licenses and rules in the
ScanCode database to produce a single index. The code for this is found
in `licensedcode/cache.py` and the helper methods for loading these
licenses and rules are found in `licensedcode/models.py`. This commit
also includes a unit test to verify that license detection succeeds
with an additional directory found in
`tests/licensedcode/test_plugin_license.py`. Part of the setup for the
unit test and future tests involves creating a new directory in
`tests/licensedcode/data` that contains sample external licenses used
in the unit tests.

Signed-off-by: Kevin Ji <kyji1011@gmail.com>

Author: kji22

src/licensedcode/cache.py

@@ -35,6 +35,7 @@
 LICENSE_INDEX_FILENAME = 'index_cache'
 LICENSE_LOCKFILE_NAME = 'scancode_license_index_lockfile'
 LICENSE_CHECKSUM_FILE = 'scancode_license_index_tree_checksums'
+CACHED_DIRECTORIES_FILENAME = 'cached_directories'
 
 
 @attr.s(slots=True)
@@ -58,6 +59,7 @@ def load_or_build(
         timeout=LICENSE_INDEX_LOCK_TIMEOUT,
         licenses_data_dir=None,
         rules_data_dir=None,
+        additional_directories=None,
     ):
         """
         Load or build and save and return a LicenseCache object.
@@ -66,7 +68,8 @@ def load_or_build(
         On the side, we load cached or build license db, SPDX symbols and other
         license-related data structures.
 
-        - If the cache exists, it is returned unless corrupted or ``force`` is True.
+        - If the cache exists, it is returned unless corrupted, ``force`` is True, or if we pass in additional
+          directories containing licenses that are not present in the existing cache.
         - If the cache does not exist, a new index is built and cached.
         - If ``index_all_languages`` is True, include texts in all languages when
           building the license index. Otherwise, only include the English license \
@@ -75,11 +78,30 @@ def load_or_build(
         idx_cache_dir = os.path.join(licensedcode_cache_dir, LICENSE_INDEX_DIR)
         create_dir(idx_cache_dir)
         cache_file = os.path.join(idx_cache_dir, LICENSE_INDEX_FILENAME)
+        cached_directories_file = os.path.join(idx_cache_dir, CACHED_DIRECTORIES_FILENAME)
 
         has_cache = os.path.exists(cache_file) and os.path.getsize(cache_file)
+        has_cached_directories = os.path.exists(cached_directories_file) and os.path.getsize(cached_directories_file)
+        should_rebuild_cache = False
+
+        if has_cached_directories:
+            # if we have cached additional directories of licenses, check if those licenses are equal to the additional
+            # directories passed in
+            with open(cached_directories_file, 'rb') as file:
+                cached_additional_directories = pickle.load(file)
+
+            # we need to rebuild the cache if the list of additional directories we passed in is different than
+            # the set of additional directories current included in the index cache
+            should_rebuild_cache = additional_directories is not None \
+                                   and sorted(additional_directories) != sorted(cached_additional_directories)
+        else:
+            # otherwise, we don't have a file of cached directories. If there are additional directories passed in,
+            # we know we need to make a new cache file.
+            if additional_directories:
+                should_rebuild_cache = True
 
         # bypass build if cache exists
-        if has_cache and not force:
+        if has_cache and not force and not should_rebuild_cache:
             try:
                 return load_cache_file(cache_file)
             except Exception as e:
@@ -92,6 +114,8 @@ def load_or_build(
         from licensedcode.models import licenses_data_dir as ldd
         from licensedcode.models import rules_data_dir as rdd
         from licensedcode.models import load_licenses
+        from licensedcode.models import load_licenses_from_multiple_dirs
+        from licensedcode.models import get_license_dirs
         from scancode import lockfile
 
         licenses_data_dir = licenses_data_dir or ldd
@@ -106,13 +130,21 @@ def load_or_build(
                 # Here, the cache is either stale or non-existing: we need to
                 # rebuild all cached data (e.g. mostly the index) and cache it
 
-                licenses_db = load_licenses(licenses_data_dir=licenses_data_dir)
+                if additional_directories:
+                    additional_license_dirs = get_license_dirs(additional_dirs=additional_directories)
+                    combined_directories = [licenses_data_dir] + additional_license_dirs
+                    licenses_db = load_licenses_from_multiple_dirs(license_directories=combined_directories)
+                else:
+                    licenses_db = load_licenses(licenses_data_dir=licenses_data_dir)
 
+                # create a single merged index containing license data from licenses_data_dir
+                # and data from additional directories
                 index = build_index(
                     licenses_db=licenses_db,
                     licenses_data_dir=licenses_data_dir,
                     rules_data_dir=rules_data_dir,
                     index_all_languages=index_all_languages,
+                    additional_directories=additional_directories,
                 )
 
                 spdx_symbols = build_spdx_symbols(licenses_db=licenses_db)
@@ -131,6 +163,10 @@ def load_or_build(
                 with open(cache_file, 'wb') as fn:
                     pickle.dump(license_cache, fn, protocol=PICKLE_PROTOCOL)
 
+                # save the list of additional directories included in the cache
+                with open(cached_directories_file, 'wb') as file:
+                    pickle.dump(additional_directories, file, protocol=PICKLE_PROTOCOL)
+
                 return license_cache
 
         except lockfile.LockTimeout:
@@ -143,27 +179,50 @@ def build_index(
     licenses_data_dir=None,
     rules_data_dir=None,
     index_all_languages=False,
+    additional_directories=None,
 ):
     """
     Return an index built from rules and licenses directories
 
     If ``index_all_languages`` is True, include texts and rules in all languages.
     Otherwise, only include the English license texts and rules (the default)
+    If ``additional_directories`` is not None, we will include licenses and rules
+    from these additional directories in the returned index.
     """
     from licensedcode.index import LicenseIndex
+    from licensedcode.models import get_license_dirs
+    from licensedcode.models import get_rule_dirs
     from licensedcode.models import get_rules
+    from licensedcode.models import get_rules_from_multiple_dirs
     from licensedcode.models import get_all_spdx_key_tokens
     from licensedcode.models import get_license_tokens
     from licensedcode.models import licenses_data_dir as ldd
     from licensedcode.models import rules_data_dir as rdd
     from licensedcode.models import load_licenses
+    from licensedcode.models import load_licenses_from_multiple_dirs
     from licensedcode.legalese import common_license_words
 
     licenses_data_dir = licenses_data_dir or ldd
     rules_data_dir = rules_data_dir or rdd
 
-    licenses_db = licenses_db or load_licenses(licenses_data_dir=licenses_data_dir)
-    rules = get_rules(licenses_db=licenses_db, rules_data_dir=rules_data_dir)
+    if not licenses_db:
+        if additional_directories:
+            # combine the licenses in these additional directories with the licenses in the original DB
+            additional_license_dirs = get_license_dirs(additional_dirs=additional_directories)
+            combined_license_directories = [licenses_data_dir] + additional_license_dirs
+            # generate a single combined license db with all licenses
+            licenses_db = load_licenses_from_multiple_dirs(license_dirs=combined_license_directories)
+        else:
+            licenses_db = load_licenses(licenses_data_dir=licenses_data_dir)
+
+    if additional_directories:
+        # if we have additional directories, extract the rules from them
+        additional_rule_dirs = get_rule_dirs(additional_dirs=additional_directories)
+        # then combine the rules in these additional directories with the rules in the original rules directory
+        combined_rule_directories = [rules_data_dir] + additional_rule_dirs
+        rules = get_rules_from_multiple_dirs(licenses_db=licenses_db, rule_directories=combined_rule_directories)
+    else:
+        rules = get_rules(licenses_db=licenses_db, rules_data_dir=rules_data_dir)
 
     legalese = common_license_words
     spdx_tokens = set(get_all_spdx_key_tokens(licenses_db))
@@ -299,20 +358,20 @@ def build_unknown_spdx_symbol(licenses_db=None):
     return LicenseSymbolLike(licenses_db['unknown-spdx'])
 
 
-def get_cache(force=False, index_all_languages=False):
+def get_cache(force=False, index_all_languages=False, additional_directories=None):
     """
     Return a LicenseCache either rebuilt, cached or loaded from disk.
 
     If ``index_all_languages`` is True, include texts in all languages when
     building the license index. Otherwise, only include the English license \
     texts and rules (the default)
     """
-    populate_cache(force=force, index_all_languages=index_all_languages)
+    populate_cache(force=force, index_all_languages=index_all_languages, additional_directories=additional_directories)
     global _LICENSE_CACHE
     return _LICENSE_CACHE
 
 
-def populate_cache(force=False, index_all_languages=False):
+def populate_cache(force=False, index_all_languages=False, additional_directories=None):
     """
     Load or build and cache a LicenseCache. Return None.
     """
@@ -325,6 +384,7 @@ def populate_cache(force=False, index_all_languages=False):
             index_all_languages=index_all_languages,
             # used for testing only
             timeout=LICENSE_INDEX_LOCK_TIMEOUT,
+            additional_directories=additional_directories,
         )
 
 
@@ -346,11 +406,15 @@ def load_cache_file(cache_file):
             raise Exception(msg) from e
 
 
-def get_index(force=False, index_all_languages=False):
+def get_index(force=False, index_all_languages=False, additional_directories=None):
     """
     Return and eventually build and cache a LicenseIndex.
     """
-    return get_cache(force=force, index_all_languages=index_all_languages).index
+    return get_cache(
+        force=force,
+        index_all_languages=index_all_languages,
+        additional_directories=additional_directories
+    ).index
 
 
 get_cached_index = get_index

src/licensedcode/models.py

@@ -20,6 +20,7 @@
 from os.path import dirname
 from os.path import exists
 from os.path import join
+from pathlib import Path
 
 import attr
 import saneyaml
@@ -772,6 +773,68 @@ def get_rules(
     return chain(licenses_as_rules, rules)
 
 
+def get_license_dirs(
+    additional_dirs,
+):
+    """
+    Takes in a list of additional directories specified during license detection
+    and produces a list of all the subdirectories containing license files.
+    """
+    # convert to absolute path in case user passes in a relative path, which messes up building rules from licenses
+    return [f"{str(Path(path).absolute())}/licenses" for path in additional_dirs]
+
+
+def get_rule_dirs(
+    additional_dirs,
+):
+    """
+    Takes in a list of additional directories specified during license detection
+    and produces a list of all the subdirectories containing rule files.
+    """
+    return [f"{str(Path(path).absolute())}/rules" for path in additional_dirs]
+
+
+def load_licenses_from_multiple_dirs(
+    license_directories,
+    with_deprecated=False,
+):
+    """
+    Takes in a list of directories containing additional licenses to use in
+    license detection and combines all the licenses into the same mapping.
+    """
+    combined_licenses = {}
+    for license_dir in license_directories:
+        licenses = load_licenses(licenses_data_dir=license_dir, with_deprecated=False)
+        # this syntax for merging is described here: https://stackoverflow.com/a/26853961
+        combined_licenses = {**combined_licenses, **licenses}
+    return combined_licenses
+
+
+def get_rules_from_multiple_dirs(
+    licenses_db,
+    rule_directories,
+):
+    """
+    Takes in a license database, which is a mapping from key->License objects,
+    and a list of all directories containing rules to use in license detection.
+    Combines all rules together into the same data structure and validates them.
+    """
+    if rule_directories:
+        combined_rules = []
+        for rules_dir in rule_directories:
+            r = list(load_rules(
+                rules_data_dir=rules_dir,
+            ))
+            combined_rules.append(r)
+        # flatten lists of rules into a single iterable
+        rules = list(chain.from_iterable(combined_rules))
+        validate_rules(rules, licenses_db)
+        licenses_as_rules = build_rules_from_licenses(licenses_db)
+        return chain(licenses_as_rules, rules)
+    else:
+        return get_rules(licenses_db=licenses_db, rules_data_dir=rules_data_dir)
+
+
 class InvalidRule(Exception):
     pass
 

src/licensedcode/plugin_license.py

@@ -18,6 +18,7 @@
 from commoncode.resource import clean_path
 from plugincode.scan import ScanPlugin
 from plugincode.scan import scan_impl
+import click
 
 from scancode.api import SCANCODE_LICENSEDB_URL
 
@@ -139,6 +140,15 @@ class LicenseScanner(ScanPlugin):
             help_group=SCAN_OPTIONS_GROUP,
         ),
 
+        PluggableCommandLineOption(
+            ('-dir', '--additional_directories'),
+            required_options=['license'],
+            multiple=True,
+            type=click.Path(exists=True, readable=True, path_type=str),
+            help='Include additional directories for license detection.',
+            help_group=SCAN_OPTIONS_GROUP,
+        ),
+
         PluggableCommandLineOption(
             ('--reindex-licenses',),
             is_flag=True, is_eager=True,
@@ -167,7 +177,8 @@ def setup(self, **kwargs):
         loaded index.
         """
         from licensedcode.cache import populate_cache
-        populate_cache()
+        additional_directories = kwargs.get('additional_directories')
+        populate_cache(additional_directories=additional_directories)
 
     def get_scanner(
         self,
@@ -176,6 +187,7 @@ def get_scanner(
         license_text_diagnostics=False,
         license_url_template=SCANCODE_LICENSEDB_URL,
         unknown_licenses=False,
+        additional_directories=None,
         **kwargs
     ):
 
@@ -186,6 +198,7 @@ def get_scanner(
             license_text_diagnostics=license_text_diagnostics,
             license_url_template=license_url_template,
             unknown_licenses=unknown_licenses,
+            additional_directories=additional_directories,
         )
 
     def process_codebase(self, codebase, unknown_licenses, **kwargs):

src/scancode/api.py

@@ -142,6 +142,7 @@ def get_licenses(
     license_url_template=SCANCODE_LICENSEDB_URL,
     unknown_licenses=False,
     deadline=sys.maxsize,
+    additional_directories=None,
     **kwargs,
 ):
     """
@@ -168,7 +169,7 @@ def get_licenses(
     from licensedcode import cache
     from licensedcode.spans import Span
 
-    idx = cache.get_index()
+    idx = cache.get_index(additional_directories=additional_directories)
 
     detected_licenses = []
     detected_expressions = []
@@ -252,6 +253,7 @@ def _licenses_data_from_match(
         result['homepage_url'] = lic.homepage_url
         result['text_url'] = lic.text_urls[0] if lic.text_urls else ''
         result['reference_url'] = license_url_template.format(lic.key)
+        # TODO: change this in the case of a private license?
         result['scancode_text_url'] = SCANCODE_LICENSE_TEXT_URL.format(lic.key)
         result['scancode_data_url'] = SCANCODE_LICENSE_DATA_URL.format(lic.key)
 

tests/licensedcode/data/example_external_licenses/example1/licenses/example1.LICENSE

@@ -0,0 +1 @@
+The quick brown fox jumps over the lazy dog.

tests/licensedcode/data/example_external_licenses/example1/licenses/example1.yml

@@ -0,0 +1,5 @@
+key: example1
+short_name: Example External License 1
+name: Example External License 1
+category: Permissive
+owner: NexB

tests/licensedcode/data/example_external_licenses/example1/rules/example1_1.RULE

@@ -0,0 +1,2 @@
+The quick brown fox jumps over the lazy dog.
+The quick brown fox jumps over the lazy dog.

tests/licensedcode/data/example_external_licenses/example1/rules/example1_1.yml

@@ -0,0 +1,2 @@
+license_expression: example1
+is_license_text: yes

tests/licensedcode/data/example_external_licenses/example2/licenses/example2.LICENSE

@@ -0,0 +1,7 @@
+Lorem ipsum dolor sit amet, consectetur adipiscing elit,
+sed do eiusmod tempor incididunt ut labore et dolore magna aliqua.
+Ut enim ad minim veniam, quis nostrud exercitation ullamco laboris nisi
+ut aliquip ex ea commodo consequat. Duis aute irure dolor in reprehenderit
+in voluptate velit esse cillum dolore eu fugiat nulla pariatur.
+Excepteur sint occaecat cupidatat non proident, sunt in culpa qui officia
+deserunt mollit anim id est laborum.

tests/licensedcode/data/example_external_licenses/example2/licenses/example2.yml

@@ -0,0 +1,5 @@
+key: example2
+short_name: Example External License 2
+name: Example External License 2
+category: Permissive
+owner: NexB