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publish vivarium-collective/viva-api #333

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fbcd8fd
publish vivarium-collective/viva-api
jcschaff Oct 9, 2026
013f337
updated organization to UConn Health
jcschaff Oct 9, 2026
d9e8d0a
public v2ecoli and viva-uq projects
jcschaff Oct 9, 2026
9c304aa
fix v2ecoli name
jcschaff Oct 12, 2026
fc099b6
change contact name and email to Eran Agmon
jcschaff Oct 12, 2026
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38 changes: 38 additions & 0 deletions src/_releases/github.com/vivarium-collective/v2ecoli.json
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Original file line number Diff line number Diff line change
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{
"name": "v2ecoli",
"version": "0.2.0",
"organization": "University of Connecticut Health",
"repositoryURL": "https://github.com/vivarium-collective/v2ecoli",
"description": "Whole-cell E. coli model in Vivarium 2",
"permission": {
"licenses": [
{
"name": "Apache Software License 2.0",
"URL": "https://www.apache.org/licenses/LICENSE-2.0.html"
}
],
"usageType": "openSource"
},
"laborHours": 2000,
"status": "Production",
"vcs": "git",
"languages": [
"Python",
"HTML"
],
"tags": [
"Vivarium",
"Open Source",
"Python"
],
"contact": {
"name": "Eran Agmon",
"email": "agmon@uchc.edu",
"URL": "https://vivarium-collective.github.io"
},
"date": {
"created": "2020-09-08",
"lastModified": "2026-10-05",
"metadataLastUpdated": "2026-09-23"
}
}
40 changes: 40 additions & 0 deletions src/_releases/github.com/vivarium-collective/viva-api.json
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{
"name": "viva-api",
"version": "v0.9.175",
"organization": "University of Connecticut Health",
"repositoryURL": "https://github.com/vivarium-collective/viva-api",
"description": "Vivarium simulation backend",
"permission": {
"licenses": [
{
"name": "Apache Software License 2.0",
"URL": "https://www.apache.org/licenses/LICENSE-2.0.html"
}
],
"usageType": "openSource"
},
"laborHours": 2000,
"status": "Production",
"vcs": "git",
"languages": [
"Python",
"Bash",
"JavaScript",
"HTML"
],
"tags": [
"Vivarium",
"Open Source",
"Python"
],
"contact": {
"name": "Eran Agmon",
"email": "agmon@uchc.edu",
"URL": "https://vivarium-collective.github.io"
},
"date": {
"created": "2025-05-09",
"lastModified": "2026-10-07",
"metadataLastUpdated": "2026-08-03"
}
}
37 changes: 37 additions & 0 deletions src/_releases/github.com/vivarium-collective/viva-uq.json
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{
"name": "viva-uq",
"version": "0.2.0",
"organization": "University of Connecticut Health",
"repositoryURL": "https://github.com/vivarium-collective/viva-uq",
"description": "Portable forward uncertainty quantification (PCE + Sobol) for process-bigraph composites",
"permission": {
"licenses": [
{
"name": "Apache Software License 2.0",
"URL": "https://www.apache.org/licenses/LICENSE-2.0.html"
}
],
"usageType": "openSource"
},
"laborHours": 0,
"status": "Production",
"vcs": "git",
"languages": [
"Python"
],
"tags": [
"Vivarium",
"Open Source",
"Python"
],
"contact": {
"name": "Eran Agmon",
"email": "agmon@uchc.edu",
"URL": "https://vivarium-collective.github.io"
},
"date": {
"created": "2026-12-09",
"lastModified": "2026-09-23",
"metadataLastUpdated": "2026-09-23"
}
}